How to read the FATCAT result?
(Structure pairs with probability < 0.05 are significantly similar)
The two structures are
NOT significantly similar
with P-value of 9.79e-01 (raw score is 38.47)
The structure alignment has 16 equivalent positions with an
RMSD
of 2.54,without
twists
.
View the alignment file
View the graph of FATCAT chaining result
(
download the postscript file
)
View the superposition of the two structures (a pdb file in which structure 1HNS is in chain A, and modified structure 1TJ1 is in chain B)
View the superposition online by
JSmol (highly recommended)
or
Jmol
Download the pdb file
Download the rasmol script for the above pdb file
Get the transformation matrix
View Differential Distance Matrix Decomposition
Interpolating between structure 1HNS.pdb and 1TJ1.pdb, view 3D by
JSmol
, or
Jmol
.
(What is it?)
Get the
'complete' structure of 1TJ1 superimposed onto 1HNS
; or the
'complete' structure of 1HNS superimposed onto 1TJ1
(
help
)
Contact Map
Your results will be kept in the server for
one months
FATCAT
|
POSA
|
Other Servers
|
Godzik Lab
|
School of Medicine, University of California, Riverside
|
Contact Us
Current support provided by
NIH grant GM101457 - Development of the Flexible Comparative Modeling Toolkit
Previous supports provided by
NSF grant DBI-0349600, NIH grant GM63208 and NIH grant GM076221
