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Filtering criteria:
p-value (0-1)≤  opt-rmsd≤  align-len≥  gap(1-285)<  opt-len(1-285)≥

Query: d1wdya_ (Code:d.211.1.1, Length:285)    Database: (SCOP175_40)
Extract (save) results:

The list of structures whose structure alignments are with
opt_rmsd ≤ 3.5 and (opt_len ≥ 50 or opt_len covered at least 60% of the shorter protein)

(Hits are sorted by p-value and hits with p-value < 0.05 are significantly similar to the query)
no. structure code length score p-value opt-len opt-rmsd chain-rmsd align-lengapseq-ide(%)alignhomologs
1 d1ixva_ d.211.1.1 229522.98 6.89e-14 2222.49 2.122442221.31 view FFAS
2 d1uoha_ d.211.1.1 223561.86 6.96e-14 2222.94 2.522432122.63 view FFAS
3 d1n11a_ d.211.1.1 404681.49 2.22e-13 2622.89 3.122811929.54 view FFAS
4 d1ot8a_ d.211.1.1 209523.45 7.05e-13 2032.88 4.212191625.57 view FFAS
5 d1k1aa_ d.211.1.1 228554.97 1.28e-12 2063.17 3.802544821.65 view FFAS
6 d1awcb_ d.211.1.1 153395.85 1.83e-11 1532.03 2.131691626.63 view FFAS
7 d1oy3d_ d.211.1.1 220484.34 3.10e-11 2003.05 3.012323222.84 view FFAS
8 d2fo1e1 d.211.1.1 266450.11 2.98e-10 2333.05 3.332925917.47 view FFAS
9 d1bd8a_ d.211.1.1 156398.13 8.29e-10 1552.80 2.971701524.71 view FFAS
10 d1iknd_ d.211.1.1 216392.54 5.92e-09 1913.05 2.552172619.35 view FFAS
11 d1ycsb1 d.211.1.1 130302.32 1.14e-08 1251.90 1.841391423.02 view FFAS
12 d1dcqa1 d.211.1.1 154313.73 3.02e-07 1292.66 6.41137818.98 view FFAS
13 d1myoa_ d.211.1.1 118200.96 1.27e-04 1182.90 2.84123534.15 view FFAS
14 d1eyha_ a.118.9.1 144124.36 4.55e-02 833.23 11.12131486.11 view FFAS
15 d1ujka_ a.118.9.2 145118.29 5.80e-02 893.44 6.00158695.7 view FFAS
16 d1te4a_ a.118.1.16 11196.66 9.23e-02 813.07 3.181153413.91 view FFAS
17 d1bo9a_ a.65.1.1 7384.43 1.65e-01 633.07 3.1671814.08 view FFAS
18 d1wjta_ a.48.3.1 10388.92 1.71e-01 673.13 5.1888216.82 view FFAS
19 d1v2za_ a.186.1.1 106100.07 1.83e-01 573.48 4.7991344.4 view FFAS
20 d3bula1 a.46.1.1 9093.22 1.88e-01 563.29 3.4177217.79 view FFAS
21 d2b4jc1 a.48.4.1 8183.48 2.11e-01 573.03 3.3779225.06 view FFAS
22 d1gnwa1 a.45.1.1 12687.11 2.26e-01 693.30 7.78114454.39 view FFAS
23 d2jdih1 a.2.10.1 4466.59 2.39e-01 291.33 0.6340117.5 view FFAS
24 d2h80a1 a.60.1.3 7189.18 2.41e-01 453.16 6.5957128.77 view FFAS
25 d2a26a1 a.2.16.1 4766.88 2.47e-01 291.34 0.8340117.5 view FFAS
26 d1pv0a_ a.2.12.1 4673.30 2.50e-01 382.16 4.3968304.41 view FFAS
27 d1h4xa_ c.13.2.1 11083.91 2.77e-01 573.18 5.7981246.17 view FFAS
28 d2gsqa1 a.45.1.1 12783.34 2.79e-01 683.44 6.18128603.91 view FFAS
29 d1rzhh2 f.23.10.1 2547.90 2.96e-01 160.37 0.3716012.5 view FFAS
30 d2i4ra1 c.149.1.1 7476.86 3.16e-01 483.03 3.3169217.25 view FFAS
31 d1jw2a_ a.23.5.1 7273.06 3.24e-01 513.01 3.8789384.49 view FFAS
32 d1e7la1 a.140.4.1 5469.23 3.28e-01 372.20 5.9179425.06 view FFAS
33 d2gsva1 a.23.7.1 6576.42 3.55e-01 423.03 3.0960186.67 view FFAS
34 d1vqov1 a.2.2.1 6569.65 3.71e-01 442.74 2.6767231.49 view FFAS
35 d1msza_ d.68.7.1 6273.85 3.87e-01 463.44 3.18591311.86 view FFAS
36 d1jnra1 a.7.3.1 14177.54 3.87e-01 563.03 3.30122663.28 view FFAS
37 d2doea1 a.159.2.1 7077.45 3.91e-01 443.49 5.6362183.23 view FFAS
38 d2o35a1 a.293.1.1 7675.37 3.93e-01 463.36 8.3563176.35 view FFAS
39 d1iv0a_ c.55.3.8 9875.26 3.98e-01 523.40 5.91812916.05 view FFAS
40 d1kf6a1 a.7.3.1 13477.50 3.99e-01 563.24 3.73137815.84 view FFAS
41 d2cvda1 a.45.1.1 12475.12 4.11e-01 573.36 6.17102454.9 view FFAS
42 d2dt6a1 a.217.1.1 6375.90 4.50e-01 383.45 3.7752141.92 view FFAS
43 d1fl2a2 c.3.1.5 12669.91 4.63e-01 533.04 4.1191383.3 view FFAS
44 d2hepa1 a.2.21.1 4261.58 4.65e-01 292.05 1.8329013.79 view FFAS
45 d1neka1 a.7.3.1 13873.44 4.66e-01 503.01 3.47138884.35 view FFAS
46 d1gz0a2 d.79.3.3 7564.55 4.71e-01 503.23 3.63691911.59 view FFAS
47 d1k6ya1 a.4.10.1 4663.57 4.73e-01 413.08 2.8153121.89 view FFAS
48 d1gesa2 c.3.1.5 11666.08 4.88e-01 583.32 8.6497397.22 view FFAS
49 d2fl4a1 d.108.1.1 14677.25 4.89e-01 513.47 10.5071205.63 view FFAS
50 d1ijwc_ a.4.1.2 4771.40 4.89e-01 353.39 5.0548138.33 view FFAS
51 d1ng7a_ a.178.1.1 6068.03 4.96e-01 373.09 1.4160236.67 view FFAS
52 d1poca_ a.133.1.1 13470.85 4.97e-01 553.39 7.17136812.94 view FFAS
53 d1zo0a1 d.108.1.7 12663.43 4.99e-01 673.46 5.65127605.51 view FFAS
54 d1g2ha_ a.4.1.12 6160.53 5.00e-01 503.30 6.6261119.84 view FFAS
55 d2asxa1 a.274.1.1 5462.77 5.04e-01 413.07 3.3453125.66 view FFAS
56 d1pgya_ a.5.2.1 4768.24 5.08e-01 292.69 8.9154253.7 view FFAS
57 d1rrza_ a.7.10.1 6663.13 5.35e-01 433.29 4.3054117.41 view FFAS
58 d2csua1 c.2.1.8 12764.49 5.36e-01 543.13 3.03116625.17 view FFAS
59 d1umqa_ a.4.1.12 6067.15 5.39e-01 363.26 4.4350146 view FFAS
60 d1th8b_ c.13.2.1 11564.75 5.40e-01 503.13 3.2288387.95 view FFAS
61 d2gyc31 a.108.1.1 4761.24 5.48e-01 292.39 2.262906.9 view FFAS
62 d1tc3c_ a.4.1.2 5165.13 5.50e-01 343.11 3.7245112.22 view FFAS
63 d1utca1 a.118.1.4 2551.47 5.59e-01 241.64 2.552518 view FFAS
64 d1tiza_ a.39.1.5 6763.41 5.61e-01 433.50 7.2581382.47 view FFAS
65 d1a8oa_ a.28.3.1 6663.30 5.64e-01 413.39 8.0087466.9 view FFAS
66 d1r5la2 c.13.1.1 18166.57 5.67e-01 633.31 7.47134715.97 view FFAS
67 d1ojta2 c.3.1.5 12561.90 5.69e-01 543.17 5.0490364.44 view FFAS
68 d1r6ta1 a.16.1.3 5267.07 5.71e-01 343.48 1.0844104.55 view FFAS
69 d1nvpb_ a.32.1.1 4361.92 5.76e-01 272.50 2.0029213.79 view FFAS
70 d1yx0a1 d.108.1.1 15157.00 5.77e-01 693.11 7.11164956.71 view FFAS
71 d1k1va_ a.37.1.1 4159.01 5.78e-01 363.08 2.404376.98 view FFAS
72 d2fxua1 c.55.1.1 13265.43 5.97e-01 513.50 4.14109585.5 view FFAS
73 d1fvga_ d.58.28.1 18960.71 5.98e-01 683.12 3.581417310.64 view FFAS
74 d1xvaa_ c.66.1.5 29281.36 5.99e-01 543.04 2.9292386.52 view FFAS
75 d1nxja_ c.8.7.1 15668.00 6.01e-01 503.35 5.2992426.52 view FFAS
76 d1x4pa1 a.217.1.1 5362.98 6.01e-01 343.27 5.5749158.16 view FFAS
77 d1ufia_ a.30.4.1 4861.50 6.24e-01 303.03 3.363885.26 view FFAS
78 d1jfxa_ c.1.8.8 21768.62 6.27e-01 603.41 7.76141814.26 view FFAS
79 d2erla_ a.10.1.1 4057.32 6.37e-01 353.34 3.8357221.75 view FFAS
80 d2vqca1 a.4.5.78 6856.93 6.40e-01 423.39 5.9165239.23 view FFAS
81 d1j2jb_ a.7.8.1 4158.88 6.53e-01 323.32 1.9342102.38 view FFAS
82 d1jeqa1 a.140.2.1 5154.63 6.60e-01 393.35 2.9768297.35 view FFAS
83 d1gjja1 a.140.1.1 5055.74 6.67e-01 333.04 2.3566336.06 view FFAS
84 d1g2ya_ a.34.2.1 3056.32 6.86e-01 252.80 3.1827211.11 view FFAS
85 d2cmyb1 g.2.4.1 2146.09 6.88e-01 201.59 0.822110 view FFAS
86 d2hjqa1 a.140.3.2 5456.11 6.90e-01 343.33 2.1350162 view FFAS
87 d1zavu1 a.108.1.1 3055.15 6.95e-01 303.31 3.0932215.62 view FFAS
88 d2gm6a1 b.82.1.19 19061.60 6.97e-01 553.46 3.061731185.2 view FFAS
89 d1ooya2 c.124.1.2 24266.48 7.02e-01 553.35 6.89113584.42 view FFAS
90 d1fsga_ c.61.1.1 23369.02 7.03e-01 503.39 5.88106563.77 view FFAS
91 d1kq1a_ b.38.1.2 6054.70 7.08e-01 363.42 3.01511513.73 view FFAS
92 d1su1a_ d.159.1.7 18454.66 7.22e-01 633.46 4.1287249.2 view FFAS
93 d1ecia_ a.33.1.1 3750.66 7.23e-01 272.60 2.663033.33 view FFAS
94 d1oksa_ a.8.5.1 5154.59 7.26e-01 313.28 1.9136513.89 view FFAS
95 d1viba_ g.2.2.1 5454.58 7.30e-01 333.46 2.394299.52 view FFAS
96 d2hwna1 a.31.1.1 3956.93 7.33e-01 263.24 2.822717.41 view FFAS
97 d3cjrb1 a.4.7.1 4850.72 7.35e-01 363.42 2.5161254.92 view FFAS
98 d1k18a_ g.67.1.1 3143.39 7.72e-01 242.08 1.332843.57 view FFAS
99 d1gkab_ b.60.1.1 17452.62 7.76e-01 503.23 3.10137874.38 view FFAS
100 d1b0na1 a.34.1.1 3555.15 7.77e-01 253.47 3.1228310.71 view FFAS
101 d1gwya_ b.97.1.1 17549.66 7.81e-01 573.32 8.88145883.45 view FFAS
102 d2ctda2 g.37.1.1 3039.77 7.84e-01 181.39 1.311800 view FFAS
103 d1lb6a_ b.8.1.1 15550.87 7.89e-01 503.43 4.19116664.31 view FFAS
104 d1epba_ b.60.1.1 16049.86 7.94e-01 513.37 3.29136857.35 view FFAS
105 d1z24a1 b.60.1.1 18952.90 7.95e-01 513.37 2.19121706.61 view FFAS
106 d1beba_ b.60.1.1 15647.99 7.95e-01 523.25 4.06132807.58 view FFAS
107 d2cs7a1 d.9.2.1 5545.91 8.03e-01 353.33 7.2857223.51 view FFAS
108 d2outa1 a.140.3.2 3850.48 8.09e-01 243.13 5.653289.38 view FFAS
109 d1bk8a_ g.3.7.5 5045.10 8.11e-01 333.24 4.4560271.67 view FFAS
110 d1n8yc1 c.10.2.5 15446.00 8.12e-01 553.42 2.76107529.35 view FFAS
111 d1fs1a1 a.158.1.1 4147.71 8.13e-01 263.02 2.3060345 view FFAS
112 d1kcfa1 a.140.2.1 3644.10 8.15e-01 232.38 1.6523013.04 view FFAS
113 d1nuba3 g.68.1.1 5844.86 8.20e-01 363.49 7.5361254.92 view FFAS
114 d2pf1a2 g.32.1.1 3046.02 8.24e-01 232.78 3.462966.9 view FFAS
115 d1wjpa2 g.37.1.1 2439.11 8.25e-01 171.54 1.451705.88 view FFAS
116 d1zrja1 a.140.2.1 3749.25 8.29e-01 243.26 2.5033912.12 view FFAS
117 d1jb0k_ f.30.1.1 4647.96 8.30e-01 283.46 3.3559315.08 view FFAS
118 d1a1ia1 g.37.1.1 2939.71 8.34e-01 201.89 1.842229.09 view FFAS
119 d1hnra_ a.155.1.1 4742.78 8.34e-01 353.46 3.3146116.52 view FFAS
120 d1myna_ g.3.7.4 4446.91 8.46e-01 273.48 0.79401310 view FFAS
121 d2dlka2 g.37.1.1 3644.36 8.48e-01 263.17 1.6828210.71 view FFAS
122 d2j7ja1 g.37.1.1 2838.16 8.50e-01 201.90 1.872220 view FFAS
123 d1j5ja_ g.3.7.2 3644.50 8.54e-01 263.28 1.4149232.04 view FFAS
124 d2f4la1 b.23.3.1 26846.30 8.61e-01 603.17 3.152301703.04 view FFAS
125 d1px9a_ g.3.7.2 4242.52 8.64e-01 293.41 5.0768394.41 view FFAS
126 d1wd3a1 b.29.1.21 31946.89 8.75e-01 653.25 5.681911263.66 view FFAS
127 d1qhka_ d.100.1.2 4740.36 8.76e-01 303.30 4.4144140 view FFAS
128 d1ubdc1 g.37.1.1 2836.24 8.77e-01 201.99 1.8522213.64 view FFAS
129 d1agta_ g.3.7.2 3839.26 8.83e-01 273.09 2.0552250 view FFAS
130 d2d8va1 g.43.1.1 5436.63 8.85e-01 363.34 5.2769334.35 view FFAS
131 d2dlqa4 g.37.1.1 2739.57 8.86e-01 243.01 1.742400 view FFAS
132 d2j7ja3 g.37.1.1 2833.55 8.87e-01 191.72 1.782120 view FFAS
133 d1wjpa3 g.37.1.1 4139.34 8.88e-01 283.25 4.9780523.75 view FFAS
134 d2adra1 g.37.1.1 2942.38 8.88e-01 243.45 4.5150262 view FFAS
135 d1a7sa_ b.47.1.2 22142.15 8.90e-01 523.24 1.712021502.97 view FFAS
136 d1p7aa_ g.37.1.1 3738.64 8.91e-01 293.40 3.923785.41 view FFAS
137 d1ctda_ a.39.1.5 3440.22 8.92e-01 232.99 4.68341117.65 view FFAS
138 d1baha_ g.3.7.2 3437.89 8.93e-01 263.03 2.2451251.96 view FFAS
139 d1bboa1 g.37.1.1 2738.53 8.99e-01 243.12 2.9846222.17 view FFAS
140 d1igra1 c.10.2.5 14933.06 9.00e-01 643.49 4.95158943.8 view FFAS
141 d1x5wa2 g.37.1.1 2937.74 9.05e-01 253.23 1.302504 view FFAS
142 d1q8ha_ g.32.1.1 3440.32 9.07e-01 223.20 2.482204.55 view FFAS
143 d1m36a_ g.37.1.2 3337.71 9.09e-01 243.11 4.652400 view FFAS
144 d1r1ga_ g.3.7.2 2538.25 9.10e-01 223.09 1.442314.35 view FFAS
145 d2drpa2 g.37.1.1 2638.09 9.12e-01 233.24 1.242304.35 view FFAS
146 d1m2sa_ g.3.7.2 3737.84 9.14e-01 243.19 2.0148244.17 view FFAS
147 d2ct1a1 g.37.1.1 2834.24 9.15e-01 182.08 1.7118011.11 view FFAS
148 d1axha_ g.3.6.2 3732.24 9.16e-01 323.14 2.5953215.66 view FFAS
149 d1pnha_ g.3.7.2 3139.95 9.18e-01 203.18 1.782996.9 view FFAS
150 d3deoa1 b.34.13.2 4433.50 9.18e-01 313.25 4.5253229.43 view FFAS
151 d1xrxa1 a.43.1.7 3339.01 9.24e-01 213.31 1.542100 view FFAS
152 d1tf3a1 g.37.1.1 3135.98 9.26e-01 233.17 1.942528 view FFAS
153 d2dmda1 g.37.1.1 2835.95 9.28e-01 233.30 1.9723013.04 view FFAS
154 d2ah2a2 b.68.1.1 39946.15 9.30e-01 503.15 1.022201705 view FFAS
155 d1x4sa1 g.85.1.2 4632.41 9.34e-01 303.41 4.2857271.75 view FFAS
156 d1znfa_ g.37.1.1 2535.22 9.34e-01 233.39 2.052304.35 view FFAS
157 d2j0161 g.41.8.6 4531.69 9.34e-01 283.06 2.2647196.38 view FFAS
158 d1npea_ b.68.5.1 26336.41 9.34e-01 503.06 4.182041546.86 view FFAS
159 d1ee6a_ b.80.1.1 19728.35 9.35e-01 663.09 4.101981324.55 view FFAS
160 d1lr7a1 g.3.11.3 2532.00 9.36e-01 162.00 2.2017111.76 view FFAS
161 d1pb5a_ g.65.1.1 3530.77 9.36e-01 303.28 3.5249194.08 view FFAS
162 d2dara1 g.39.1.3 3231.51 9.38e-01 202.41 3.092220 view FFAS
163 d3d4ub1 g.9.1.3 3732.71 9.41e-01 243.14 2.1646224.35 view FFAS
164 d1rmga_ b.80.1.3 42241.89 9.45e-01 503.02 3.96133834.51 view FFAS
165 d1x4ka1 g.39.1.3 3231.39 9.47e-01 212.81 2.302104.76 view FFAS
166 d1xj1a_ g.3.6.5 4728.50 9.47e-01 343.44 2.3656221.79 view FFAS
167 d1dx5i3 g.3.11.1 4029.58 9.48e-01 303.46 3.9159291.69 view FFAS
168 d1x61a2 g.39.1.3 3231.85 9.49e-01 212.96 3.742104.76 view FFAS
169 d2ho2a1 b.72.1.1 3330.56 9.49e-01 253.23 2.1652271.92 view FFAS
170 d1oc0b_ g.64.1.1 3730.74 9.50e-01 253.24 1.973492.94 view FFAS
171 d1pina1 b.72.1.1 3431.84 9.50e-01 233.27 2.14341111.76 view FFAS
172 d1zmec1 g.38.1.1 3631.85 9.51e-01 223.12 2.9046244.35 view FFAS
173 d2i9wa3 g.74.1.1 2327.97 9.51e-01 171.99 1.951925.26 view FFAS
174 d1t1ra3 c.2.1.3 2632.03 9.51e-01 203.01 1.6133133.03 view FFAS
175 d2cupa2 g.39.1.3 3132.20 9.53e-01 192.91 3.122120 view FFAS
176 d1dmca_ g.46.1.1 3128.51 9.54e-01 263.16 2.5144180 view FFAS
177 d2zjr41 g.42.1.1 3729.34 9.54e-01 253.12 2.3751261.96 view FFAS
178 d1k91a_ b.104.1.1 3729.98 9.54e-01 243.14 2.3637132.7 view FFAS
179 d1ibia2 g.39.1.3 3130.51 9.55e-01 192.70 2.3519010.53 view FFAS
180 d1x6aa2 g.39.1.3 3431.44 9.56e-01 213.19 2.792320 view FFAS
181 d1edmb_ g.3.11.1 3929.33 9.57e-01 253.26 2.4253281.89 view FFAS
182 d1ewsa_ g.9.1.1 3228.21 9.57e-01 253.13 2.4647224.26 view FFAS
183 d2dloa2 g.39.1.3 3331.05 9.58e-01 213.20 3.622324.35 view FFAS
184 d1k81a_ g.59.1.1 3628.20 9.59e-01 222.79 2.1324216.67 view FFAS
185 d1x4la2 g.39.1.3 3031.55 9.60e-01 193.17 3.302120 view FFAS
186 d2cuqa1 g.39.1.3 3230.75 9.60e-01 213.26 2.532104.76 view FFAS
187 d2jmfa1 b.72.1.1 3331.94 9.60e-01 213.50 4.2446256.52 view FFAS
188 d2d8xa1 g.39.1.3 3229.36 9.63e-01 213.16 3.182320 view FFAS
189 d1c4ea_ g.3.4.1 3426.29 9.64e-01 212.56 2.1333120 view FFAS
190 d1wjva2 g.37.1.2 3127.66 9.64e-01 202.74 2.1652320 view FFAS
191 d2dj7a1 g.39.1.3 3130.32 9.64e-01 213.42 2.862104.76 view FFAS
192 d1x3ha2 g.39.1.3 3230.40 9.66e-01 203.42 3.5622213.64 view FFAS
193 d1cbha_ g.3.8.1 3625.94 9.67e-01 253.16 2.5239142.56 view FFAS
194 d1gl0i_ g.4.1.1 3228.20 9.67e-01 202.99 2.862448.33 view FFAS
195 d1nzia2 g.3.11.1 4126.54 9.67e-01 263.34 3.3541150 view FFAS
196 d1pvma3 g.41.13.1 3628.43 9.67e-01 233.43 2.9627414.81 view FFAS
197 d1wm7a_ g.3.7.2 2925.96 9.68e-01 212.77 2.302214.55 view FFAS
198 d2baia1 g.87.1.1 3227.32 9.70e-01 203.06 2.2320010 view FFAS
199 d1x62a1 g.39.1.3 3127.76 9.72e-01 203.29 3.192224.55 view FFAS
200 d1k5ca_ b.80.1.3 33328.97 9.72e-01 513.37 2.501731221.73 view FFAS
201 d2d8xa2 g.39.1.3 2528.43 9.74e-01 173.19 3.422474.17 view FFAS
202 d1dsva_ g.40.1.1 3123.78 9.76e-01 233.09 0.3952291.92 view FFAS
203 d1m0ja_ g.46.1.1 2827.69 9.77e-01 173.25 2.602140 view FFAS
204 d1dfna_ g.9.1.1 3023.11 9.79e-01 233.27 3.2736135.56 view FFAS
205 d2cura2 g.39.1.3 2526.77 9.80e-01 173.44 3.562474.17 view FFAS
206 d1y29a_ g.3.6.2 2822.23 9.86e-01 183.25 1.0839215.13 view FFAS

Other servers by our group
POSA »
Multiple structure alignment with POGs
XtalPred »
Prediction of Protein Crystallizability
AIDA »
Ab Initio Domain Assembly Server
FFAS »
Fold & Function Assignment
PDBflex »
Flexibilty of protein structures
ConSole »
Solenoid detection from contact maps
Protael »
JS library for visualizing biological sequences
Cancer3D »
A database to analyze mutations and structures
Current support provided by NIH grant GM101457 - Development of the Flexible Comparative Modeling Toolkit, Previous supports provided by NSF grant DBI-0349600, NIH grant GM63208 and NIH grant GM076221