This website is free and open to all users and there is no login requirement, but users can register to save their results in a password protected directory

Filtering criteria:
p-value (0-1)≤  opt-rmsd≤  align-len≥  gap(1-)<  opt-len(1-)≥

Query: d1n2xa1 (Code:..., Length:)    Database: (SCOP175_40)
Extract (save) results:

The list of structures whose structure alignments are with
opt_rmsd ≤ 3.5 and (opt_len ≥ 50 or opt_len covered at least 60% of the shorter protein)

(Hits are sorted by p-value and hits with p-value < 0.05 are significantly similar to the query)
no. structure code length score p-value opt-len opt-rmsd chain-rmsd align-lengapseq-ide(%)alignhomologs
Warning: no structure homologs are found for this query in current database. Please try a different criteria from the top form, such as, try a different database, enlarge p-value, leave others blank etc.

Other servers by our group
POSA »
Multiple structure alignment with POGs
XtalPred »
Prediction of Protein Crystallizability
AIDA »
Ab Initio Domain Assembly Server
FFAS »
Fold & Function Assignment
PDBflex »
Flexibilty of protein structures
ConSole »
Solenoid detection from contact maps
Protael »
JS library for visualizing biological sequences
Cancer3D »
A database to analyze mutations and structures
Current support provided by NIH grant GM101457 - Development of the Flexible Comparative Modeling Toolkit, Previous supports provided by NSF grant DBI-0349600, NIH grant GM63208 and NIH grant GM076221